INFO [199231] ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! INFO [199231] Package versions INFO [199231] ---------------- INFO [199231] ESMValCore: 2.8.0 INFO [199231] ESMValTool: 2.8.0 INFO [199231] ---------------- INFO [199231] Using config file /nird/home/hrl/.esmvaltool/config-user.yml INFO [199231] Writing program log files to: /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/main_log.txt /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/main_log_debug.txt INFO [199231] Loading ESGF configuration from /nird/home/hrl/.esmvaltool/esgf-pyclient.yml INFO [199231] Bootstrapping MyProxy server root of trust. INFO [199231] Bootstrapping MyProxy server root of trust. INFO [199231] Logged on to ESGF INFO [199231] Starting the Earth System Model Evaluation Tool at time: 2023-06-05 19:10:57 UTC INFO [199231] ---------------------------------------------------------------------- INFO [199231] RECIPE = /nird/home/hrl/recipe_mydiag.yml INFO [199231] RUNDIR = /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run INFO [199231] WORKDIR = /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/work INFO [199231] PREPROCDIR = /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/preproc INFO [199231] PLOTDIR = /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/plots INFO [199231] ---------------------------------------------------------------------- INFO [199231] Running tasks using at most 2 processes INFO [199231] If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. INFO [199231] If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. INFO [199231] Creating tasks from recipe INFO [199231] Creating tasks for diagnostic diag_map_2 INFO [199231] Creating diagnostic task diag_map_2/Global_Ocean_Surface_regrid_map INFO [199231] Creating preprocessor task diag_map_2/profile_max_temp INFO [199231] Creating preprocessor 'prep_depth_max_1' task for variable 'profile_max_temp' WARNING [199231] 'CMIP6' rootpaths '/scratch/hrl/ESGF/CMIP6' set in config-user.yml do not exist INFO [199231] Found input files for Dataset: thetao, Omon, CMIP6, MPI-ESM1-2-HR, ['CMIP', 'ScenarioMIP'], ['historical', 'ssp126'], r1i1p1f1, gn, v20190710 INFO [199231] Found input files for Dataset: thetao, Omon, CMIP6, CNRM-ESM2-1, ['CMIP', 'ScenarioMIP'], ['historical', 'ssp126'], r1i1p1f2, gn, ['v20181206', 'v20190328'] WARNING [199231] 'OBS6' rootpaths '/scratch/hrl/ESGF/obsdata' set in config-user.yml do not exist INFO [199231] Found input files for Dataset: thetao, Omon, OBS6, WOA, 2018 INFO [199231] PreprocessingTask diag_map_2/profile_max_temp created. INFO [199231] These tasks will be executed: diag_map_2/profile_max_temp, diag_map_2/Global_Ocean_Surface_regrid_map INFO [199231] Wrote recipe with version numbers and wildcards to: file:///projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/recipe_mydiag_filled.yml INFO [199231] Running 2 tasks using 2 processes INFO [199401] Starting task diag_map_2/profile_max_temp in process [199401] INFO [199231] Progress: 1 tasks running, 1 tasks waiting for ancestors, 0/2 done WARNING [199401] /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/iris/fileformats/netcdf/saver.py:2297: UserWarning: 'title' is being added as CF data variable attribute, but 'title' should only be a CF global attribute. warnings.warn(msg) WARNING [199401] /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/iris/fileformats/netcdf/saver.py:2297: UserWarning: 'title' is being added as CF data variable attribute, but 'title' should only be a CF global attribute. warnings.warn(msg) WARNING [199401] /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/iris/fileformats/netcdf/saver.py:2297: UserWarning: 'title' is being added as CF data variable attribute, but 'title' should only be a CF global attribute. warnings.warn(msg) WARNING [199401] /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/iris/fileformats/netcdf/saver.py:2297: UserWarning: 'title' is being added as CF data variable attribute, but 'title' should only be a CF global attribute. warnings.warn(msg) WARNING [199401] /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/iris/coords.py:2249: UserWarning: Cannot check if coordinate is contiguous: Invalid operation for 'year', with 0 bound(s). Contiguous bounds are only defined for 1D coordinates with 2 bounds. Metadata may not be fully descriptive for 'year'. Ignoring bounds. warnings.warn(msg.format(str(exc), self.name())) WARNING [199401] There were warnings in variable thetao: Coordinate lev units meters converted to m loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc WARNING [199401] /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/iris/coords.py:2249: UserWarning: Cannot check if coordinate is contiguous: Invalid operation for 'year', with 0 bound(s). Contiguous bounds are only defined for 1D coordinates with 2 bounds. Metadata may not be fully descriptive for 'year'. Ignoring bounds. warnings.warn(msg.format(str(exc), self.name())) WARNING [199401] /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/iris/coords.py:2249: UserWarning: Cannot check if coordinate is contiguous: Invalid operation for 'year', with 0 bound(s). Contiguous bounds are only defined for 1D coordinates with 2 bounds. Metadata may not be fully descriptive for 'year'. Ignoring bounds. warnings.warn(msg.format(str(exc), self.name())) INFO [199401] Successfully completed task diag_map_2/profile_max_temp (priority 1) in 0:52:57.573805 INFO [199231] Progress: 0 tasks running, 1 tasks waiting for ancestors, 1/2 done INFO [199402] Starting task diag_map_2/Global_Ocean_Surface_regrid_map in process [199402] INFO [199402] Running command ['/diagnostics/esmvaltool/2.8.0/bin/python', '/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/diag_map_2/Global_Ocean_Surface_regrid_map/settings.yml'] INFO [199402] Writing output to /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/work/diag_map_2/Global_Ocean_Surface_regrid_map INFO [199402] Writing plots to /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/plots/diag_map_2/Global_Ocean_Surface_regrid_map INFO [199402] Writing log to /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/diag_map_2/Global_Ocean_Surface_regrid_map/log.txt INFO [199402] To re-run this diagnostic script, run: cd /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/diag_map_2/Global_Ocean_Surface_regrid_map; MPLBACKEND="Agg" /diagnostics/esmvaltool/2.8.0/bin/python /diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/diag_map_2/Global_Ocean_Surface_regrid_map/settings.yml INFO [199231] Progress: 1 tasks running, 0 tasks waiting for ancestors, 1/2 done INFO [199402] Maximum memory used (estimate): 0.6 GB INFO [199402] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. INFO [199231] Maximum memory used (estimate): 53.5 GB INFO [199231] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. ERROR [199231] Program terminated abnormally, see stack trace below for more information: multiprocessing.pool.RemoteTraceback: """ Traceback (most recent call last): File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_task.py", line 795, in _run_task output_files = task.run() File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_task.py", line 262, in run self.output_files = self._run(input_files) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_task.py", line 593, in _run raise DiagnosticError( esmvalcore._task.DiagnosticError: Diagnostic script ocean/diagnostic_maps.py failed with return code 1. See the log in /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/diag_map_2/Global_Ocean_Surface_regrid_map/log.txt """ The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_main.py", line 521, in run fire.Fire(ESMValTool()) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/fire/core.py", line 141, in Fire component_trace = _Fire(component, args, parsed_flag_args, context, name) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/fire/core.py", line 475, in _Fire component, remaining_args = _CallAndUpdateTrace( File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/fire/core.py", line 691, in _CallAndUpdateTrace component = fn(*varargs, **kwargs) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_main.py", line 408, in run self._run(recipe, session) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_main.py", line 450, in _run process_recipe(recipe_file=recipe, session=session) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_main.py", line 122, in process_recipe recipe.run() File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_recipe/recipe.py", line 1308, in run self.tasks.run(max_parallel_tasks=self.session['max_parallel_tasks']) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_task.py", line 724, in run self._run_parallel(max_parallel_tasks) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_task.py", line 767, in _run_parallel _copy_results(task, running[task]) File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvalcore/_task.py", line 790, in _copy_results task.output_files, task.products = future.get() File "/diagnostics/esmvaltool/2.8.0/lib/python3.10/multiprocessing/pool.py", line 774, in get raise self._value esmvalcore._task.DiagnosticError: Diagnostic script ocean/diagnostic_maps.py failed with return code 1. See the log in /projects/NS9560K/www/diagnostics/esmvaltool/hrl/tmp/recipe_mydiag_20230605_191052/run/diag_map_2/Global_Ocean_Surface_regrid_map/log.txt INFO [199231] If you have a question or need help, please start a new discussion on https://github.com/ESMValGroup/ESMValTool/discussions If you suspect this is a bug, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues To make it easier to find out what the problem is, please consider attaching the files run/recipe_*.yml and run/main_log_debug.txt from the output directory.